PDB ID 1AQD     CHAIN A
Protein name HLA-DR1 CLASS II HISTOCOMPATIBILITY PROTEIN
Uniprot Accession P01903
The number of similar proteins 133
The number of binding states 13
The number of binding partners 9

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
1AQD (CHAIN: A)
1 P04229  
2 A0A1V1IGJ9  
3 P04229   P0A0L3  
4 P13760   4Y19  
5 P04229   P01730  
6 D0AB36   4H1L  
7 P04229   Q48898  
8 P01911   2WBJ   2WBJ  
9 P28067   P04229   P28068  
10 P04229   6R0E   6R0E  
11 P04664   8EUQ   8EUQ  
12 P13760   3T0E   3T0E   P01730  
13 P01903   P04229   P04229   P01552  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  >9
  8
  7
  6
  5
  4
  3
  2
  1
  0

Sequence information

1   IKEEHVIIQA   EFYLNPDQSG   EFMFDFDGDE   IFHVDMAKKE   TVWRLEEFGR   50
51   FASFEAQGAL   ANIAVDKANL   EIMTKRSNYT   PITNVPPEVT   VLTNSPVELR   100
101   EPNVLICFID   KFTPPVVNVT   WLRNGKPVTT   GVSETVFLPR   EDHLFRKFHY   150
151   LPFLPSTEDV   YDCRVEHWGL   DEPLLKHWEF   DAPSPLPETT   EN   200

Variants

Residue AA Source dbSNP Clinical
Significance
 Allele
Frequency
(> 0.0001)		 Disease name
5_HIS ARG 8.3kJPN
chr6:32410231 		-
- 0.0001 -
76_ARG SER gnomAD
chr6:32410443 		rs201781094
- 0.000287349 -
81_PRO LEU 8.3kJPN
chr6:32410459 		rs754838655
- 0.0001 -
93_THR ILE 8.3kJPN
chr6:32410986 		rs1407197550
- 0.0001 -
123_ARG GLN gnomAD
chr6:32411076 		rs138462914
- 0.000576168 -
160_VAL ILE 8.3kJPN
chr6:32411186 		rs200798853
- 0.0001 -
168_TRP ARG gnomAD
chr6:32411210 		rs199723815
- 0.000150153 -
168_TRP ARG 8.3kJPN
chr6:32411210 		rs199723815
- 0.0215 -
169_GLY SER 8.3kJPN
chr6:32411213 		-
- 0.0001 -
(Powered by wupsivus)

Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.