PDB ID 1BE4     CHAIN A
Protein name NUCLEOSIDE DIPHOSPHATE TRANSFERASE
Uniprot Accession P52175
The number of similar proteins 92
The number of binding states 3
The number of binding partners 1

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
1BE4 (CHAIN: A)
1 P52175   P52175  
2 P15531  
3 P52174   P52174   P52174   P52174  

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Format:

Molecule viewer


Only interaction residues
#binding
partners
  1
  0

Sequence information

1   ANSERTFIAI   KPDGVQRGLM   GEIIKRFEQK   GFRLVAMKFM   RASEDLLKEH   50
51   YIDLKDRPFF   AGLVKYMHSG   PVVAMVWEGL   NVVKTGRVML   GETNPADSKP   100
101   GTIRGDFCIQ   VGRNIIHGSD   SVESAEKEIA   LWFRPEELVN   YKSCAQNWIY   150
151   E           200

Variants

Residue AA Source dbSNP Clinical
Significance
 Allele
Frequency
(> 0.0001)		 Disease name
6_ARG HIS gnomAD
chr17:49233032 		rs549666032
- 0.00014455 -
6_ARG HIS 8.3kJPN
chr17:49233032 		rs549666032
- 0.0001 -
9_ILE VAL 8.3kJPN
chr17:49244216 		-
- 0.0001 -
18_ARG TRP gnomAD
chr17:49233067 		rs201563847
- 0.000208787 -
18_ARG TRP 8.3kJPN
chr17:49233067 		rs201563847
- 0.0001 -
24_ILE LEU 8.3kJPN
chr17:49233085 		rs759044927
- 0.0012 -
34_ARG CYS 8.3kJPN
chr17:49244291 		-
- 0.0001 -
45_GLU LYS 8.3kJPN
chr17:49237347 		rs755294523
- 0.0001 -
49_LYS ARG 8.3kJPN
chr17:49245622 		rs761801862
- 0.0004 -
53_ILE THR gnomAD
chr17:49245634 		rs138302461
- 0.000124477 -
58_ARG TER 8.3kJPN
chr17:49245648 		rs201461737
- 0.0004 -
72_PRO LEU 8.3kJPN
chr17:49237429 		rs776130833
- 0.0001 -
86_THR MET gnomAD
chr17:49238549 		rs138270461
- 0.000101145 -
105_ARG CYS gnomAD
chr17:49238605 		rs763413179
- 0.000219102 -
108_PHE LEU 8.3kJPN
chr17:49238616 		-
- 0.0001 -
114_ARG GLY 8.3kJPN
chr17:49238632 		rs763630436
- 0.0001 -
116_ILE VAL 8.3kJPN
chr17:49248852 		rs1440561057
- 0.0002 -
131_GLY SER 8.3kJPN
chr17:49239138 		rs1367335923
- 0.0001 -
137_GLU GLY 8.3kJPN
chr17:49239157 		rs1186396877
- 0.0001 -
146_ALA VAL 8.3kJPN
chr17:49248943 		rs1568128553
- 0.0001 -
149_TRP CYS 8.3kJPN
chr17:49248953 		rs1465853356
- 0.0001 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.