PDB ID 1FR8     CHAIN A
Protein name BETA 1,4 GALACTOSYLTRANSFERASE
Uniprot Accession P08037
The number of similar proteins 23
The number of binding states 3
The number of binding partners 2

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
1FR8 (CHAIN: A)
1 P08037  
2 Monomeric state
3 P29752  

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Format:

Molecule viewer


Only interaction residues
#binding
partners
  2
  1
  0

Sequence information

1   GSNLTSAPVP   STTTRSLTAC   PEESPLLVGP   MLIEFNIPVD   LKLVEQQNPK   50
51   VKLGGRYTPM   DCISPHKVAI   IIPFRNRQEH   LKYWLYYLHP   ILQRQQLDYG   100
101   IYVINQAGES   MFNRAKLLNV   GFKEALKDYD   YNCFVFSDVD   LIPMNDHNTY   150
151   RCFSQPRHIS   VAMDKFGFSL   PYVQYFGGVS   ALSKQQFLSI   NGFPNNYWGW   200
201   GGEDDDIYNR   LAFRGMSVSR   PNAVIGKCRM   IRHSRDKKNE   PNPQRFDRIA   250
251   HTKETMLSDG   LNSLTYMVLE   VQRYPLYTKI   TVDIGTPS     300

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
134_CYS TYR 8.3kJPN
chr9:33166779
-
- 0.0001 -
135_PRO LEU gnomAD
chr9:33166776
rs150774756
- 0.000103712 -
158_VAL MET 8.3kJPN
chr9:33135375
rs750518389
- 0.0001 -
164_ASN ASP 8.3kJPN
chr9:33135357
rs774489888
- 0.0002 -
170_ARG CYS 8.3kJPN
chr9:33135339
rs770241599
- 0.0001 -
175_ASP GLU gnomAD
chr9:33135322
rs146996656
- 0.000135204 -
178_SER CYS 8.3kJPN
chr9:33135314
-
- 0.0001 -
189_ARG CYS 8.3kJPN
chr9:33135282
rs142441831
- 0.0001 -
197_TYR TER ClinVar
chr9:33135256
rs1840249855
Pathogenic - B4GALT1-congenital disorder of glycosylation [MONDO:MONDO:0011772,MedGen:C2931009,OMIM:607091,Orphanet:79332]
221_ALA VAL 8.3kJPN
chr9:33120603
rs780815290
- 0.0016 -
238_GLU LYS 8.3kJPN
chr9:33120553
-
- 0.0001 -
257_PRO ALA gnomAD
chr9:33120496
rs201417912
- 0.000103395 -
261_HIS ARG gnomAD
chr9:33120483
rs9169
- 0.000401622 -
268_SER ALA 8.3kJPN
chr9:33120463
rs755251855
- 0.0001 -
302_LEU VAL gnomAD
chr9:33116056
rs150249236
- 0.000111357 -
305_ASN SER 8.3kJPN
chr9:33116046
rs376696269
- 0.0001 -
333_SER ALA 8.3kJPN
chr9:33113851
-
- 0.0002 -
342_CYS GLY 8.3kJPN
chr9:33113824
-
- 0.0007 -
356_ASN SER ClinVar
chr9:33113781
-
Pathogenic - Combined low LDL and fibrinogen [MONDO:MONDO:0957260,MedGen:C5830484,OMIM:620364]
385_VAL LEU 8.3kJPN
chr9:33113508
-
- 0.0001 -
397_ASP TYR 8.3kJPN
chr9:33113472
-
- 0.0001 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.