PDB ID 1KHC     CHAIN A
Protein name DNA cytosine-5 methyltransferase 3B2
Uniprot Accession O88509
The number of similar proteins 17
The number of binding states 2
The number of binding partners 1

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
1KHC (CHAIN: A)
1 Monomeric state
2 Q9UBC3  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  1
  0

Sequence information

1   GDSTEYQDDK   EFGIGDLVWG   KIKGFSWWPA   MVVSWKATSK   RQAMPGMRWV   50
51   QWFGDGKFSE   ISADKLVALG   LFSQHFNLAT   FNKLVSYRKA   MYHTLEKARV   100
101   RAGKTFSSSP   GESLEDQLKP   MLEWAHGGFK   PTGIEGLKPN   KKQPENK   150

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
236_VAL MET 8.3kJPN
chr20:31376690
-
- 0.0001 -
238_GLY TER ClinVar
chr20:31376696
rs2145960216
Pathogenic - Centromeric instability of chromosomes 1,9 and 16 and immunodeficiency [MONDO:MONDO:0000133,MedGen:C0398788,OMIM:PS242860,Orphanet:2268]
259_ARG TER ClinVar
chr20:31376759
-
Pathogenic - Centromeric instability of chromosomes 1,9 and 16 and immunodeficiency [MONDO:MONDO:0000133,MedGen:C0398788,OMIM:PS242860,Orphanet:2268]
267_TRP TER ClinVar
chr20:31376785
rs1979652729
Pathogenic - Centromeric instability of chromosomes 1,9 and 16 and immunodeficiency [MONDO:MONDO:0000133,MedGen:C0398788,OMIM:PS242860,Orphanet:2268]
277_SER PRO ClinVar
chr20:31376813
rs121908947
Pathogenic - Immunodeficiency-centromeric instability-facial anomalies syndrome 1 [MONDO:MONDO:0009454,MedGen:C4551557,OMIM:242860,Orphanet:2268]
303_VAL ILE gnomAD
chr20:31379479
rs145632647
- 0.00067602 -
306_ARG GLN 8.3kJPN
chr20:31379489
-
- 0.0001 -
(Powered by wupsivus)

Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.