PDB ID 1KZP     CHAIN B
Protein name Protein Farnesyltransferase beta subunit
Uniprot Accession Q02293
The number of similar proteins 59
The number of binding states 1
The number of binding partners 1

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
1KZP (CHAIN: B)
1 Q04631  

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Format:

Molecule viewer


Only interaction residues
#binding
partners
  1
  0

Sequence information

1   MASSSSFTYY   CPPSSSPVWS   EPLYSLRPEH   ARERLQDDSV   ETVTSIEQAK   50
51   VEEKIQEVFS   SYKFNHLVPR   LVLQREKHFH   YLKRGLRQLT   DAYECLDASR   100
101   PWLCYWILHS   LELLDEPIPQ   IVATDVCQFL   ELCQSPDGGF   GGGPGQYPHL   150
151   APTYAAVNAL   CIIGTEEAYN   VINREKLLQY   LYSLKQPDGS   FLMHVGGEVD   200
201   VRSAYCAASV   ASLTNIITPD   LFEGTAEWIA   RCQNWEGGIG   GVPGMEAHGG   250
251   YTFCGLAALV   ILKKERSLNL   KSLLQWVTSR   QMRFEGGFQG   RCNKLVDGCY   300
301   SFWQAGLLPL   LHRALHAQGD   PALSMSHWMF   HQQALQEYIL   MCCQCPAGGL   350
351   LDKPGKSRDF   YHTCYCLSGL   SIAQHFGSGA   MLHDVVMGVP   ENVLQPTHPV   400
401   YNIGPDKVIQ   ATTHFLQKPV   PGFEECEDAV   TSDPATD     450

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
50_LYS GLU 8.3kJPN
chr14:65470970
rs751384349
- 0.0001 -
65_ASN SER 8.3kJPN
chr14:65471016
rs1178450762
- 0.0001 -
122_VAL ALA 8.3kJPN
chr14:65482425
rs750753585
- 0.0033 -
124_THR ALA 8.3kJPN
chr14:65482430
-
- 0.0001 -
154_TYR PHE gnomAD
chr14:65494257
rs570650527
- 0.000111364 -
154_TYR PHE 8.3kJPN
chr14:65494257
rs570650527
- 0.0007 -
180_TYR HIS 8.3kJPN
chr14:65494432
-
- 0.0003 -
207_ALA THR gnomAD
chr14:65499341
rs762864284
- 0.000127483 -
272_SER ARG 8.3kJPN
chr14:65507631
-
- 0.0001 -
305_ALA VAL 8.3kJPN
chr14:65511120
rs750508990
- 0.0001 -
321_PRO ARG 8.3kJPN
chr14:65519962
rs752728103
- 0.0001 -
325_MET VAL 8.3kJPN
chr14:65519973
rs777774182
- 0.0004 -
357_SER LEU 8.3kJPN
chr14:65521295
rs776664530
- 0.0001 -
377_GLY SER 8.3kJPN
chr14:65521354
rs548466281
- 0.0001 -
390_PRO SER 8.3kJPN
chr14:65521393
-
- 0.0001 -
391_GLU LYS 8.3kJPN
chr14:65521396
rs767077504
- 0.0001 -
393_ALA THR 8.3kJPN
chr14:65521402
rs757715962
- 0.0001 -
405_PRO ARG gnomAD
chr14:65527930
rs139801576
- 0.000135206 -
418_LYS THR gnomAD
chr14:65527969
rs145309091
- 0.000664042 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.