PDB ID 1LTX     CHAIN B
Protein name RAB GERANYLGERANYLTRANSFERASE BETA SUBUNIT
Uniprot Accession Q08603
The number of similar proteins 26
The number of binding states 4
The number of binding partners 4

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
1LTX (CHAIN: B)
1 Q08602  
2 Q7Z6K3  
3 Q9UKC9   Q7Z6K3  
4 Q7Z6K3   O15498  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  3
  2
  1
  0

Sequence information

1   MGTQQKDVTI   KSDAPDTLLL   EKHADYIASY   GSKKDDYEYC   MSEYLRMSGV   50
51   YWGLTVMDLM   GQLHRMNKEE   ILVFIKSCQH   ECGGVSASIG   HDPHLLYTLS   100
101   AVQILTLYDS   IHVINVDKVV   AYVQSLQKED   GSFAGDIWGE   IDTRFSFCAV   150
151   ATLALLGKLD   AINVEKAIEF   VLSCMNFDGG   FGCRPGSESH   AGQIYCCTGF   200
201   LAITSQLHQV   NSDLLGWWLC   ERQLPSGGLN   GRPEKLPDVC   YSWWVLASLK   250
251   IIGRLHWIDR   EKLRSFILAC   QDEETGGFAD   RPGDMVDPFH   TLFGIAGLSL   300
301   LGEEQIKPVS   PVFCMPEEVL   QRVNVQPELV   S     350

Variants

Residue AA Source dbSNP Clinical
Significance
 Allele
Frequency
(> 0.0001)		 Disease name
51_TYR ASN 8.3kJPN
chr1:76254883 		-
- 0.0001 -
64_HIS LEU 8.3kJPN
chr1:76254923 		-
- 0.0001 -
100_SER GLY 8.3kJPN
chr1:76255030 		rs200085575
- 0.0001 -
116_VAL ILE 8.3kJPN
chr1:76255673 		rs969619008
- 0.0001 -
159_LEU PRO 8.3kJPN
chr1:76257153 		-
- 0.0003 -
174_CYS TYR 8.3kJPN
chr1:76257198 		-
- 0.0001 -
187_SER CYS 8.3kJPN
chr1:76257237 		-
- 0.0002 -
195_TYR SER 8.3kJPN
chr1:76257870 		-
- 0.0001 -
250_LYS ARG 8.3kJPN
chr1:76259812 		-
- 0.0001 -
264_ARG HIS 8.3kJPN
chr1:76259854 		rs143074736
- 0.0001 -
275_THR MET 8.3kJPN
chr1:76259887 		rs981262171
- 0.0001 -
293_PHE LEU 8.3kJPN
chr1:76260216 		-
- 0.0001 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.