PDB ID 1MC0     CHAIN A
Protein name 3',5'-cyclic nucleotide phosphodiesterase 2A
Uniprot Accession Q922S4
The number of similar proteins 1
The number of binding states 1
The number of binding partners 0

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
1MC0 (CHAIN: A)
1 Monomeric state

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  0

Sequence information

1   EDQKDEKGYT   DHDRKILQLC   GELFDLDATS   LQLKVLQYLQ   QETQATHCCL   50
51   LLVSEDNLQL   SCKVIGDKVL   GEEVSFPLTM   GRLGQVVEDK   QCIQLKDLTS   100
101   DDVQQLQNML   GCELQAMLCV   PVISRATDQV   VALACAFNKL   GGDFFTDEDE   150
151   HVIQHCFHYT   GTVLTSTLAF   QKEQKLKCEC   QALLQVAKNL   FTHLDDVSVL   200
201   LQEIITEARN   LSNAEICSVF   LLDQNELVAK   VFDGGVVDDE   SYEIRIPADQ   250
251   GIAGHVATTG   QILNIPDAYA   HPLFYRGVDD   STGFRTRNIL   CFPIKNENQE   300
301   VIGVAELVNK   INGPWFSKFD   EDLATAFSIY   CGISIAHSLL   YKKVNEAQYR   350
351   SHLANEMMMY   LEHHHHHH         400

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
216_THR ILE gnomAD
chr11:72301503
rs341047
- 0.107659 -
216_THR ILE 8.3kJPN
chr11:72301503
rs341047
- 0.0712 -
218_ARG CYS gnomAD
chr11:72301498
rs371714314
- 0.000197605 -
233_ASP TYR 8.3kJPN
chr11:72301271
-
- 0.0001 -
240_LYS GLU 8.3kJPN
chr11:72301250
-
- 0.0001 -
242_LEU PHE 8.3kJPN
chr11:72301244
rs767305080
- 0.0002 -
250_ARG GLN 8.3kJPN
chr11:72301009
-
- 0.0001 -
255_CYS GLY gnomAD
chr11:72300995
rs765765634
- 0.000101294 -
262_ASP TYR 8.3kJPN
chr11:72300974
-
- 0.0001 -
315_MET ILE gnomAD
chr11:72299932
rs148079689
- 0.000324509 -
354_GLU LYS gnomAD
chr11:72297215
rs201256182
- 0.000102465 -
356_GLU LYS gnomAD
chr11:72297209
rs139844982
- 0.000659105 -
361_HIS ASP 8.3kJPN
chr11:72297194
-
- 0.0001 -
369_VAL MET 8.3kJPN
chr11:72297170
rs758964461
- 0.0001 -
387_GLN TER ClinVar
chr11:72297116
rs1591023585
Pathogenic - 6 conditions|Intellectual developmental disorder with paroxysmal dyskinesia or seizures [6 conditions|MONDO:MONDO:0030900,MedGen:C5436894,OMIM:619150]
412_THR MET 8.3kJPN
chr11:72296445
rs763395523
- 0.0001 -
455_ASP ASN 8.3kJPN
chr11:72295748
-
- 0.0001 -
473_ASP GLY ClinVar
chr11:72295693
rs1855880808
Pathogenic - Intellectual developmental disorder with paroxysmal dyskinesia or seizures [MONDO:MONDO:0030900,MedGen:C5436894,OMIM:619150]
474_ALA VAL 8.3kJPN
chr11:72295690
-
- 0.0001 -
523_SER GLY 8.3kJPN
chr11:72295307
-
- 0.0001 -
543_HIS LEU 8.3kJPN
chr11:72295246
-
- 0.0004 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.