PDB ID 1N4S     CHAIN A
Protein name Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha
Uniprot Accession Q04631
The number of similar proteins 70
The number of binding states 2
The number of binding partners 2

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
1N4S (CHAIN: A)
1 P53610  
2 Q02293  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  2
  1
  0

Sequence information

1   MAATEGVGES   APGGEPGQPE   QPPPPPPPPP   AQQPQEEEMA   AEAGEAAASP   50
51   MDDGFLSLDS   PTYVLYRDRA   EWADIDPVPQ   NDGPSPVVQI   IYSEKFRDVY   100
101   DYFRAVLQRD   ERSERAFKLT   RDAIELNAAN   YTVWHFRRVL   LRSLQKDLQE   150
151   EMNYIIAIIE   EQPKNYQVWH   HRRVLVEWLK   DPSQELEFIA   DILNQDAKNY   200
201   HAWQHRQWVI   QEFRLWDNEL   QYVDQLLKED   VRNNSVWNQR   HFVISNTTGY   250
251   SDRAVLEREV   QYTLEMIKLV   PHNESAWNYL   KGILQDRGLS   RYPNLLNQLL   300
301   DLQPSHSSPY   LIAFLVDIYE   DMLENQCDNK   EDILNKALEL   CEILAKEKDT   350
351   IRKEYWRYIG   RSLQSKHSRE   SDIPASV       400

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
64_VAL ILE gnomAD
chr8:42911679
rs143321089
- 0.00179624 -
75_ILE THR 8.3kJPN
chr8:42914258
rs779020919
- 0.0005 -
85_ASN SER gnomAD
chr8:42914288
rs151278515
- 0.0015814 -
85_ASN ASP 8.3kJPN
chr8:42914287
-
- 0.0001 -
108_GLN LEU 8.3kJPN
chr8:42919280
-
- 0.0001 -
117_PHE LEU gnomAD
chr8:42919308
rs138334666
- 0.000266455 -
121_ARG TRP 8.3kJPN
chr8:42919318
rs745664729
- 0.0001 -
130_ASN SER 8.3kJPN
chr8:42919346
rs768087218
- 0.0001 -
147_ASP ASN 8.3kJPN
chr8:42924735
rs778274499
- 0.0001 -
184_GLN ARG 8.3kJPN
chr8:42927368
rs201638101
- 0.0016 -
287_ARG HIS gnomAD
chr8:42939867
rs777603932
- 0.000109658 -
328_ASP ASN gnomAD
chr8:42939989
rs139144868
- 0.000868512 -
332_ASP VAL 8.3kJPN
chr8:42940002
-
- 0.0001 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.