PDB ID 1NDF     CHAIN A
Protein name Carnitine Acetyltransferase
Uniprot Accession P47934
The number of similar proteins 11
The number of binding states 1
The number of binding partners 0

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
1NDF (CHAIN: A)
1 Monomeric state

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Format:

Molecule viewer


Only interaction residues
#binding
partners
  0

Sequence information

1   AHQDALPRLP   VPPLQQSLDY   YLKALQPIVS   EEEWAHTKQL   VDEFQTSGGV   50
51   GERLQKGLER   RAKKMENWLS   EWWLKTAYLQ   FRQPVVIYSS   PGVILPKQDF   100
101   VDLQGQLRFA   AKLIEGVLDF   KSMIDNETLP   VEFLGGQPLC   MNQYYQILSS   150
151   CRVPGPKQDS   VVNFLKSKRP   PTHITVVHNY   QFFELDVYHS   DGTPLTSDQI   200
201   FVQLEKIWNS   SLQSNKEPVG   ILTSNHRNTW   AKAYNNLIKD   KVNRESVNSI   250
251   QKSIFTVCLD   KQVPRVSDDV   YRNHVAGQML   HGGGSKFNSG   NRWFDKTLQF   300
301   IVAEDGSCGM   VYEHAAAEGP   PIVALVDHVM   EYTKKPELVR   SPMVPLPMPK   350
351   KLRFNITPEI   KNDIEKAKQN   LSIMIQDLDI   MMLTFHHFGK   DFPKSEKLSP   400
401   DAFIQVALQL   AYYRIYGQAC   ATYESASLRM   FHLGRTDTIR   SASIDSLAFV   450
451   KGMGDSTVPE   QQKVELLRKA   VQAHRAYTDR   AIRGEAFDRH   LLGLKLQAIE   500
501   DLVSMPDIFM   DTSYAIAMHF   NLSTSQVPAK   TDCVMFFGPV   VPDGYGICYN   550
551   PMEAHINFSV   SAYNSCAETN   AARMAHYLEK   ALLDMRTLLQ   NHPRAK   600

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
37_ARG GLN 8.3kJPN
chr9:131870274
rs762135628
- 0.0001 -
39_PRO SER 8.3kJPN
chr9:131870269
-
- 0.0001 -
88_GLU LYS 8.3kJPN
chr9:131870122
rs752545811
- 0.0001 -
89_ARG HIS 8.3kJPN
chr9:131870118
rs776507175
- 0.0001 -
90_ARG LEU 8.3kJPN
chr9:131870115
-
- 0.0003 -
110_TYR CYS gnomAD
chr9:131866548
rs141970897
- 0.00112542 -
117_TYR PHE gnomAD
chr9:131866527
rs138099517
- 0.000393003 -
119_SER ASN 8.3kJPN
chr9:131866521
-
- 0.0001 -
122_VAL MET gnomAD
chr9:131866513
rs141699474
- 0.000193748 -
122_VAL MET 8.3kJPN
chr9:131866513
rs141699474
- 0.0005 -
128_ASP GLU gnomAD
chr9:131866493
rs148243375
- 0.00142777 -
164_GLY ALA gnomAD
chr9:131864818
rs149054165
- 0.00030646 -
164_GLY VAL 8.3kJPN
chr9:131864818
rs149054165
- - -
164_GLY TRP 8.3kJPN
chr9:131864819
rs765377737
- 0.0001 -
166_LYS ARG 8.3kJPN
chr9:131864812
-
- 0.0001 -
179_SER PHE 8.3kJPN
chr9:131864773
rs370724037
- 0.0001 -
205_VAL MET 8.3kJPN
chr9:131864696
rs199855222
- 0.0001 -
215_ASP GLY 8.3kJPN
chr9:131864323
-
- 0.0001 -
226_ALA VAL 8.3kJPN
chr9:131864290
rs1176306475
- 0.0001 -
256_ARG HIS 8.3kJPN
chr9:131864200
rs202114201
- 0.0004 -
262_ALA THR gnomAD
chr9:131864183
rs147944652
- 0.000390233 -
265_THR ASN gnomAD
chr9:131864173
rs367866636
- 0.000107587 -
273_ARG TRP gnomAD
chr9:131862957
rs141122671
- 0.00037695 -
277_ARG HIS gnomAD
chr9:131862944
rs146338921
- 0.000391994 -
278_SER PRO 8.3kJPN
chr9:131862942
-
- 0.0001 -
283_ILE THR 8.3kJPN
chr9:131862926
rs756164400
- 0.0001 -
291_THR ALA gnomAD
chr9:131862903
rs145822836
- 0.00437467 -
291_THR ALA 8.3kJPN
chr9:131862903
rs145822836
- 0.0006 -
299_VAL MET gnomAD
chr9:131862879
rs552235102
- 0.000155519 -
321_ARG CYS 8.3kJPN
chr9:131862813
rs369950286
- 0.0001 -
326_THR MET 8.3kJPN
chr9:131862797
rs763262443
- 0.0001 -
330_ILE ASN 8.3kJPN
chr9:131862241
-
- 0.0001 -
346_ALA VAL gnomAD
chr9:131862193
rs772964815
- 0.000103516 -
346_ALA THR gnomAD
chr9:131862194
rs200277103
- 0.00121807 -
360_GLU LYS gnomAD
chr9:131862152
rs146958522
- 0.000135498 -
368_VAL MET 8.3kJPN
chr9:131860913
-
- 0.0002 -
372_LEU MET gnomAD
chr9:131860901
rs3118635
- 0.998932 -
378_PRO ARG 8.3kJPN
chr9:131860882
-
- 0.0002 -
379_LYS GLU 8.3kJPN
chr9:131860880
-
- 0.0001 -
382_ARG GLN 8.3kJPN
chr9:131860870
rs751354831
- 0.0001 -
394_GLU LYS 8.3kJPN
chr9:131860835
rs145415027
- 0.0001 -
403_MET ILE 8.3kJPN
chr9:131860647
-
- 0.0001 -
411_VAL MET 8.3kJPN
chr9:131860625
rs182284225
- 0.0001 -
415_HIS ASP 8.3kJPN
chr9:131860613
-
- 0.0001 -
428_SER ARG gnomAD
chr9:131860574
rs566951989
- 0.000135259 -
431_ALA VAL 8.3kJPN
chr9:131860564
-
- 0.0001 -
432_PHE LEU gnomAD
chr9:131860562
rs140551503
- 0.000401805 -
449_CYS ARG 8.3kJPN
chr9:131860411
rs376125366
- 0.0001 -
464_ARG HIS 8.3kJPN
chr9:131860365
rs769843161
- 0.0003 -
471_ALA ASP 8.3kJPN
chr9:131860344
rs755266497
- 0.0002 -
482_MET ILE 8.3kJPN
chr9:131860310
-
- 0.0002 -
504_ARG GLN 8.3kJPN
chr9:131859545
rs372470432
- 0.0001 -
518_ARG TER 8.3kJPN
chr9:131858390
rs750302998
- 0.0001 -
569_VAL MET gnomAD
chr9:131857852
rs762425351
- 0.000124731 -
573_GLY SER gnomAD
chr9:131857840
rs201468277
- 0.000224867 -
575_GLY SER 8.3kJPN
chr9:131857834
rs148153787
- 0.0001 -
590_SER LEU 8.3kJPN
chr9:131857788
rs767998416
- 0.0002 -
596_ALA VAL 8.3kJPN
chr9:131857770
rs769803786
- 0.0001 -
600_ALA THR 8.3kJPN
chr9:131857759
rs777404087
- 0.0004 -
604_ALA VAL 8.3kJPN
chr9:131857746
rs779910980
- 0.0001 -
605_HIS ARG 8.3kJPN
chr9:131857743
rs762626138
- 0.0001 -
610_ALA VAL 8.3kJPN
chr9:131857728
rs1283563840
- 0.0002 -
615_ARG LEU gnomAD
chr9:131857713
rs149016840
- 0.00133402 -
624_ALA PRO gnomAD
chr9:131857687
rs17459086
- 0.0423023 -
624_ALA PRO 8.3kJPN
chr9:131857687
rs17459086
- 0.0582 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.