PDB ID 1NI1     CHAIN A
Protein name Protein farnesyltransferase alpha subunit
Uniprot Accession Q04631
The number of similar proteins 70
The number of binding states 2
The number of binding partners 2

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
1NI1 (CHAIN: A)
1 Q02293  
2 P53610  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  2
  1
  0

Sequence information

1   FLSLDSPTYV   LYRDRAEWAD   IDPVPQNDGP   SPVVQIIYSE   KFRDVYDYFR   50
51   AVLQRDERSE   RAFKLTRDAI   ELNAANYTVW   HFRRVLLRSL   QKDLQEEMNY   100
101   ITAIIEEQPK   NYQVWHHRRV   LVEWLKDPSQ   ELEFIADILN   QDAKNYHAWQ   150
151   HRQWVIQEFR   LWDNELQYVD   QLLKEDVRNN   SVWNQRHFVI   SNTTGYSDRA   200
201   VLEREVQYTL   EMIKLVPHNE   SAWNYLKGIL   QDRGLSRYPN   LLNQLLDLQP   250
251   SHSSPYLIAF   LVDIYEDMLE   NQCDNKEDIL   NKALELCEIL   AKEKDTIRKE   300
301   YWRYIGRSLQ   SKHSR         350

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
64_VAL ILE gnomAD
chr8:42911679
rs143321089
- 0.00179624 -
75_ILE THR 8.3kJPN
chr8:42914258
rs779020919
- 0.0005 -
85_ASN SER gnomAD
chr8:42914288
rs151278515
- 0.0015814 -
85_ASN ASP 8.3kJPN
chr8:42914287
-
- 0.0001 -
108_GLN LEU 8.3kJPN
chr8:42919280
-
- 0.0001 -
117_PHE LEU gnomAD
chr8:42919308
rs138334666
- 0.000266455 -
121_ARG TRP 8.3kJPN
chr8:42919318
rs745664729
- 0.0001 -
130_ASN SER 8.3kJPN
chr8:42919346
rs768087218
- 0.0001 -
147_ASP ASN 8.3kJPN
chr8:42924735
rs778274499
- 0.0001 -
184_GLN ARG 8.3kJPN
chr8:42927368
rs201638101
- 0.0016 -
287_ARG HIS gnomAD
chr8:42939867
rs777603932
- 0.000109658 -
328_ASP ASN gnomAD
chr8:42939989
rs139144868
- 0.000868512 -
332_ASP VAL 8.3kJPN
chr8:42940002
-
- 0.0001 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.