PDB ID 1NL4     CHAIN B
Protein name Protein farnesyltransferase beta subunit
Uniprot Accession Q02293
The number of similar proteins 59
The number of binding states 1
The number of binding partners 1

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
1NL4 (CHAIN: B)
1 Q04631  

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Format:

Molecule viewer


Only interaction residues
#binding
partners
  1
  0

Sequence information

1   LYSLRPEHAR   ERLQDDSVET   VTSIEQAKVE   EKIQEVFSSY   KFNHLVPRLV   50
51   LQREKHFHYL   KRGLRQLTDA   YECLDASRPW   LCYWILHSLE   LLDEPIPQIV   100
101   ATDVCQFLEL   CQSPDGGFGG   GPGQYPHLAP   TYAAVNALCI   IGTEEAYNVI   150
151   NREKLLQYLY   SLKQPDGSFL   MHVGGEVDVR   SAYCAASVAS   LTNIITPDLF   200
201   EGTAEWIARC   QNWEGGIGGV   PGMEAHGGYT   FCGLAALVIL   KKERSLNLKS   250
251   LLQWVTSRQM   RFEGGFQGRC   NKLVDGCYSF   WQAGLLPLLH   RALHAQGDPA   300
301   LSMSHWMFHQ   QALQEYILMC   CQCPAGGLLD   KPGKSRDFYH   TCYCLSGLSI   350
351   AQHFGSGAML   HDVVMGVPEN   VLQPTHPVYN   IGPDKVIQAT   THFLQKPVPG   400
401   F           450

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
50_LYS GLU 8.3kJPN
chr14:65470970
rs751384349
- 0.0001 -
65_ASN SER 8.3kJPN
chr14:65471016
rs1178450762
- 0.0001 -
122_VAL ALA 8.3kJPN
chr14:65482425
rs750753585
- 0.0033 -
124_THR ALA 8.3kJPN
chr14:65482430
-
- 0.0001 -
154_TYR PHE gnomAD
chr14:65494257
rs570650527
- 0.000111364 -
154_TYR PHE 8.3kJPN
chr14:65494257
rs570650527
- 0.0007 -
180_TYR HIS 8.3kJPN
chr14:65494432
-
- 0.0003 -
207_ALA THR gnomAD
chr14:65499341
rs762864284
- 0.000127483 -
272_SER ARG 8.3kJPN
chr14:65507631
-
- 0.0001 -
305_ALA VAL 8.3kJPN
chr14:65511120
rs750508990
- 0.0001 -
321_PRO ARG 8.3kJPN
chr14:65519962
rs752728103
- 0.0001 -
325_MET VAL 8.3kJPN
chr14:65519973
rs777774182
- 0.0004 -
357_SER LEU 8.3kJPN
chr14:65521295
rs776664530
- 0.0001 -
377_GLY SER 8.3kJPN
chr14:65521354
rs548466281
- 0.0001 -
390_PRO SER 8.3kJPN
chr14:65521393
-
- 0.0001 -
391_GLU LYS 8.3kJPN
chr14:65521396
rs767077504
- 0.0001 -
393_ALA THR 8.3kJPN
chr14:65521402
rs757715962
- 0.0001 -
405_PRO ARG gnomAD
chr14:65527930
rs139801576
- 0.000135206 -
418_LYS THR gnomAD
chr14:65527969
rs145309091
- 0.000664042 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.