PDB ID 1NM8     CHAIN A
Protein name Carnitine O-acetyltransferase
Uniprot Accession P43155
The number of similar proteins 10
The number of binding states 1
The number of binding partners 0

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
1NM8 (CHAIN: A)
1 Monomeric state

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Format:

Molecule viewer


Only interaction residues
#binding
partners
  0

Sequence information

1   MRGSHHHHHH   TDPLPRLPVP   PLQQSLDHYL   KALQPIVSEE   EWAHTKQLVD   50
51   EFQASGGVGE   RLQKGLERRA   RKTENWLSEW   WLKTAYLQYR   QPVVIYSSPG   100
101   VMLPKQDFVD   LQGQLRFAAK   LIEGVLDFKV   MIDNETLPVE   YLGGKPLCMN   150
151   QYYQILSSCR   VPGPKQDTVS   NFSKTKKPPT   HITVVHNYQF   FELDVYHSDG   200
201   TPLTADQIFV   QLEKIWNSSL   QTNKEPVGIL   TSNHRNSWAK   AYNTLIKDKV   250
251   NRDSVRSIQK   SIFTVCLDAT   MPRVSEDVYR   SHVAGQMLHG   GGSRLNSGNR   300
301   WFDKTLQFIV   AEDGSCGLVY   EHAAAEGPPI   VTLLDYVIEY   TKKPELVRSP   350
351   MVPLPMPKKL   RFNITPEIKS   DIEKAKQNLS   IMIQDLDITV   MVFHHFGKDF   400
401   PKSEKLSPDA   FIQMALQLAY   YRIYGQACAT   YESASLRMFH   LGRTDTIRSA   450
451   SMDSLTFVKA   MDDSSVTEHQ   KVELLRKAVQ   AHRGYTDRAI   RGEAFDRHLL   500
501   GLKLQAIEDL   VSTPDIFMDT   SYAIAMHFHL   STSQVPAKTD   CVMFFGPVVP   550
551   DGYGVCYNPM   EAHINFSLSA   YNSCAETNAA   RLAHYLEKAL   LDMRALLQSH   600
601   PRAKLISEED   LSLISG         650

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
16_ARG GLN 8.3kJPN
chr9:131870274
rs762135628
- 0.0001 -
18_PRO SER 8.3kJPN
chr9:131870269
-
- 0.0001 -
67_GLU LYS 8.3kJPN
chr9:131870122
rs752545811
- 0.0001 -
68_ARG HIS 8.3kJPN
chr9:131870118
rs776507175
- 0.0001 -
69_ARG LEU 8.3kJPN
chr9:131870115
-
- 0.0003 -
89_TYR CYS gnomAD
chr9:131866548
rs141970897
- 0.00112542 -
96_TYR PHE gnomAD
chr9:131866527
rs138099517
- 0.000393003 -
98_SER ASN 8.3kJPN
chr9:131866521
-
- 0.0001 -
101_VAL MET gnomAD
chr9:131866513
rs141699474
- 0.000193748 -
101_VAL MET 8.3kJPN
chr9:131866513
rs141699474
- 0.0005 -
107_ASP GLU gnomAD
chr9:131866493
rs148243375
- 0.00142777 -
143_GLY ALA gnomAD
chr9:131864818
rs149054165
- 0.00030646 -
143_GLY VAL 8.3kJPN
chr9:131864818
rs149054165
- - -
143_GLY TRP 8.3kJPN
chr9:131864819
rs765377737
- 0.0001 -
145_LYS ARG 8.3kJPN
chr9:131864812
-
- 0.0001 -
158_SER PHE 8.3kJPN
chr9:131864773
rs370724037
- 0.0001 -
184_VAL MET 8.3kJPN
chr9:131864696
rs199855222
- 0.0001 -
194_ASP GLY 8.3kJPN
chr9:131864323
-
- 0.0001 -
205_ALA VAL 8.3kJPN
chr9:131864290
rs1176306475
- 0.0001 -
235_ARG HIS 8.3kJPN
chr9:131864200
rs202114201
- 0.0004 -
241_ALA THR gnomAD
chr9:131864183
rs147944652
- 0.000390233 -
244_THR ASN gnomAD
chr9:131864173
rs367866636
- 0.000107587 -
252_ARG TRP gnomAD
chr9:131862957
rs141122671
- 0.00037695 -
256_ARG HIS gnomAD
chr9:131862944
rs146338921
- 0.000391994 -
257_SER PRO 8.3kJPN
chr9:131862942
-
- 0.0001 -
262_ILE THR 8.3kJPN
chr9:131862926
rs756164400
- 0.0001 -
270_THR ALA gnomAD
chr9:131862903
rs145822836
- 0.00437467 -
270_THR ALA 8.3kJPN
chr9:131862903
rs145822836
- 0.0006 -
278_VAL MET gnomAD
chr9:131862879
rs552235102
- 0.000155519 -
300_ARG HIS VAR_080636 rs138665095
US - Neurodegeneration with brain iron accumulation 8 (NBIA8) [MIM:617917]
300_ARG CYS 8.3kJPN
chr9:131862813
rs369950286
- 0.0001 -
305_THR MET 8.3kJPN
chr9:131862797
rs763262443
- 0.0001 -
309_ILE ASN 8.3kJPN
chr9:131862241
-
- 0.0001 -
325_ALA VAL gnomAD
chr9:131862193
rs772964815
- 0.000103516 -
325_ALA THR gnomAD
chr9:131862194
rs200277103
- 0.00121807 -
339_GLU LYS gnomAD
chr9:131862152
rs146958522
- 0.000135498 -
347_VAL MET 8.3kJPN
chr9:131860913
-
- 0.0002 -
351_LEU MET gnomAD
chr9:131860901
rs3118635
- 0.998932 -
357_PRO ARG 8.3kJPN
chr9:131860882
-
- 0.0002 -
358_LYS GLU 8.3kJPN
chr9:131860880
-
- 0.0001 -
361_ARG GLN 8.3kJPN
chr9:131860870
rs751354831
- 0.0001 -
373_GLU LYS 8.3kJPN
chr9:131860835
rs145415027
- 0.0001 -
382_MET ILE 8.3kJPN
chr9:131860647
-
- 0.0001 -
390_VAL MET 8.3kJPN
chr9:131860625
rs182284225
- 0.0001 -
394_HIS ASP 8.3kJPN
chr9:131860613
-
- 0.0001 -
407_SER ARG gnomAD
chr9:131860574
rs566951989
- 0.000135259 -
410_ALA VAL 8.3kJPN
chr9:131860564
-
- 0.0001 -
411_PHE LEU gnomAD
chr9:131860562
rs140551503
- 0.000401805 -
428_CYS ARG 8.3kJPN
chr9:131860411
rs376125366
- 0.0001 -
443_ARG HIS 8.3kJPN
chr9:131860365
rs769843161
- 0.0003 -
450_ALA ASP 8.3kJPN
chr9:131860344
rs755266497
- 0.0002 -
461_MET ILE 8.3kJPN
chr9:131860310
-
- 0.0002 -
483_ARG GLN 8.3kJPN
chr9:131859545
rs372470432
- 0.0001 -
497_ARG TER 8.3kJPN
chr9:131858390
rs750302998
- 0.0001 -
548_VAL MET gnomAD
chr9:131857852
rs762425351
- 0.000124731 -
552_GLY SER gnomAD
chr9:131857840
rs201468277
- 0.000224867 -
554_GLY SER 8.3kJPN
chr9:131857834
rs148153787
- 0.0001 -
569_SER LEU 8.3kJPN
chr9:131857788
rs767998416
- 0.0002 -
575_ALA VAL 8.3kJPN
chr9:131857770
rs769803786
- 0.0001 -
579_ALA THR 8.3kJPN
chr9:131857759
rs777404087
- 0.0004 -
583_ALA VAL 8.3kJPN
chr9:131857746
rs779910980
- 0.0001 -
584_HIS ARG 8.3kJPN
chr9:131857743
rs762626138
- 0.0001 -
589_ALA VAL 8.3kJPN
chr9:131857728
rs1283563840
- 0.0002 -
594_ARG LEU gnomAD
chr9:131857713
rs149016840
- 0.00133402 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.