PDB ID 1RK8     CHAIN B
Protein name Mago nashi protein
Uniprot Accession P49028
The number of similar proteins 11
The number of binding states 6
The number of binding partners 7

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
1RK8 (CHAIN: B)
1 Q9V535   P82804  
2 Q9V535  
3 Q9VEC5   Q9V535  
4 P61326   Q9Y5S9  
5 Q9Y5S9   O15234   P38919  
6 Q9Y5S9   O15234   P38919   Q9BZI7  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  4
  3
  2
  1
  0

Sequence information

1   MSTEDFYLRY   YVGHKGKFGH   EFLEFEFRPD   GKLRYANNSN   YKNDTMIRKE   50
51   AFVHQSVMEE   LKRIIIDSEI   MQEDDLPWPP   PDRVGRQELE   IVIGDEHISF   100
101   TTSKTGSLVD   VNRSKDPEGL   RCFYYLVQDL   KCLVFSLIGL   HFKIKPI   150

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
4_SER ASN gnomAD
chr12:10766118
rs143571407
- 0.000119365 -
29_PRO SER 8.3kJPN
chr12:10766044
rs1385828630
- 0.0006 -
54_HIS ARG 8.3kJPN
chr12:10762530
-
- 0.0001 -
56_SER GLY 8.3kJPN
chr1:53699309
rs763619997
- 0.0002 -
66_ASP ASN 8.3kJPN
chr12:10762495
-
- 0.0001 -
76_ALA GLY 8.3kJPN
chr1:53699248
-
- 0.0001 -
80_PRO SER 8.3kJPN
chr1:53699237
rs868704502
- 0.0012 -
86_ARG TRP 8.3kJPN
chr1:53699219
rs561502516
- 0.0001 -
86_ARG GLN 8.3kJPN
chr12:10762434
rs1050010220
- 0.0002 -
138_ILE THR 8.3kJPN
chr12:10758905
rs750856861
- 0.0002 -
141_HIS TYR 8.3kJPN
chr12:10758897
rs1183872654
- 0.0001 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.