PDB ID 2E5A     CHAIN A
Protein name Lipoyltransferase 1
Uniprot Accession O46419
The number of similar proteins 2
The number of binding states 1
The number of binding partners 0

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
2E5A (CHAIN: A)
1 Monomeric state

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Format:

Molecule viewer


Only interaction residues
#binding
partners
  0

Sequence information

1   TVKSGLILQS   ISNDVYHNLA   VEDWIHDHMN   LEGKPVLFLW   RNSPTVVIGR   50
51   HQNPWQECNL   NLMREEGVKL   ARRRSGGGTV   YHDMGNINLT   FFTTKKKYDR   100
101   MENLKLVVRA   LKAVHPHLDV   QATKRFDLLL   DGQFKISGTA   SKIGRNAAYH   150
151   HCTLLCGTDG   TFLSSLLKSP   YQGIRSNATA   STPALVKNLM   EKDPTLTCEV   200
201   VINAVATEYA   TSHQIDNHIH   LINPTDETVF   PGINSKAIEL   QTWEWIYGKT   250
251   PKFSVDTSFT   VLHEQSHVEI   KVFIDVKNGR   IEVCNIEAPD   HWLPLEICDQ   300
301   LNSSLIGSKF   SPIETTVLTS   ILHRTYPGDD   ELHSKWNILC   EKIKGIM   350

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
11_ILE VAL gnomAD
chr2:99778529
rs151267116
- 0.000147197 -
11_ILE VAL 8.3kJPN
chr2:99778529
rs151267116
- 0.0001 -
45_SER PHE ClinVar
chr2:99778632
rs767568897
Likely pathogenic - Lipoyl transferase 1 deficiency|not provided [MONDO:MONDO:0014576,MedGen:C4225379,OMIM:616299,Orphanet:401862|MedGen:CN517202]
66_GLU LYS 8.3kJPN
chr2:99778694
-
- 0.0001 -
68_ILE THR 8.3kJPN
chr2:99778701
rs754749935
- 0.001 -
72_ARG GLY gnomAD
chr2:99778712
rs137973334
- 0.000116002 -
82_HIS ARG 8.3kJPN
chr2:99778743
rs1212695584
- 0.0001 -
125_ARG LYS gnomAD
chr2:99778872
rs150683925
- 0.000187023 -
128_LEU ARG 8.3kJPN
chr2:99778881
-
- 0.0001 -
153_THR ALA ClinVar
chr2:99778955
rs786205156
Pathogenic - Lipoyl transferase 1 deficiency [MONDO:MONDO:0014576,MedGen:C4225379,OMIM:616299,Orphanet:401862]
161_THR MET 8.3kJPN
chr2:99778980
rs143482964
- 0.0198 -
179_THR ALA gnomAD
chr2:99779033
rs116463717
- 0.00245472 -
187_LYS GLU 8.3kJPN
chr2:99779057
-
- 0.0001 -
212_TYR CYS 8.3kJPN
chr2:99779133
rs187886723
- 0.0026 -
242_THR ILE 8.3kJPN
chr2:99779223
-
- 0.0001 -
243_TRP TER ClinVar
chr2:99779226
rs863224892
Likely pathogenic - Lipoyl transferase 1 deficiency [MONDO:MONDO:0014576,MedGen:C4225379,OMIM:616299,Orphanet:401862]
266_SER TER ClinVar
chr2:99779295
rs137891647
Pathogenic/Likely pathogenic - Lipoyl transferase 1 deficiency|not provided [MONDO:MONDO:0014576,MedGen:C4225379,OMIM:616299,Orphanet:401862|MedGen:C3661900]
297_ILE VAL 8.3kJPN
chr2:99779387
rs745395682
- 0.0001 -
298_ARG CYS 8.3kJPN
chr2:99779390
rs576171217
- 0.0001 -
308_SER ILE 8.3kJPN
chr2:99779421
rs1387426126
- 0.0003 -
334_SER ASN 8.3kJPN
chr2:99779499
-
- 0.0001 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.