PDB ID 2GF9     CHAIN A
Protein name Ras-related protein Rab-3D
Uniprot Accession O95716
The number of similar proteins 1
The number of binding states 1
The number of binding partners 0

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
2GF9 (CHAIN: A)
1 Monomeric state

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Format:

Molecule viewer


Only interaction residues
#binding
partners
  0

Sequence information

1   MGSSHHHHHH   SSGLVPRGSD   YMFKLLLIGN   SSVGKTSFLF   RYADDSFTPA   50
51   FVSTVGIDFK   VKTVYRHDKR   IKLQIWDTAG   QERYRTITTA   YYRGAMGFLL   100
101   MYDIANQESF   AAVQDWATQI   KTYSWDNAQV   ILVGNKCDLE   DERVVPAEDG   150
151   RRLADDLGFE   FFEASAKENI   NVKQVFERLV   DVICEKMNE     200

Variants

Residue AA Source dbSNP Clinical
Significance
 Allele
Frequency
(> 0.0001)		 Disease name
41_ARG HIS 8.3kJPN
chr1:52442668 		rs747996617
- 0.0001 -
43_ALA VAL 8.3kJPN
chr19:11447948 		rs112584280
- 0.0001 -
49_SER PRO gnomAD
chr5:57913614 		rs150626053
- 0.000151682 -
64_VAL ILE VAR_051710 rs3969860
LB/B - -
64_VAL ILE gnomAD
chr19:11447886 		rs3969860
- 0.0313643 -
66_ARG HIS 8.3kJPN
chr19:11447879 		rs200374153
- 0.0003 -
69_LYS THR 8.3kJPN
chr19:18313345 		-
- 0.0001 -
70_ARG TRP gnomAD
chr1:52442582 		rs201369843
- 0.000218897 -
79_ALA VAL 8.3kJPN
chr19:11446452 		rs759551554
- 0.0001 -
82_GLU ASP 8.3kJPN
chr5:58021846 		-
- 0.0001 -
85_ARG CYS 8.3kJPN
chr19:11446435 		rs770163460
- 0.0002 -
85_ARG TRP 8.3kJPN
chr19:18311231 		rs1042272615
- 0.0001 -
88_THR ALA 8.3kJPN
chr19:11446426 		-
- 0.0001 -
93_ARG HIS 8.3kJPN
chr5:58021878 		rs775390478
- 0.0002 -
93_ARG TRP 8.3kJPN
chr19:11446411 		rs200767418
- 0.0004 -
96_MET ILE 8.3kJPN
chr5:58021888 		-
- 0.0001 -
103_ASP ALA 8.3kJPN
chr5:58021908 		-
- 0.0001 -
110_PHE LEU 8.3kJPN
chr19:11446360 		rs758439271
- 0.0001 -
111_ASN SER 8.3kJPN
chr1:52402981 		rs774214605
- 0.0001 -
139_MET VAL 8.3kJPN
chr5:58120932 		rs112747103
- 0.0001 -
141_ASP ASN gnomAD
chr19:11446174 		rs143406149
- 0.000839908 -
141_GLU GLN 8.3kJPN
chr1:52399041 		-
- 0.0001 -
141_ASP ASN 8.3kJPN
chr5:58120938 		-
- 0.0001 -
143_ARG HIS gnomAD
chr19:11446167 		rs369931189
- 0.000107492 -
143_ARG TRP 8.3kJPN
chr5:58120944 		rs895761649
- 0.0001 -
148_GLU LYS gnomAD
chr5:58120959 		rs184776073
- 0.000195717 -
151_ARG GLN gnomAD
chr19:11446143 		rs145958698
- 0.000139446 -
151_ARG TRP gnomAD
chr19:11446144 		rs72992916
- 0.00209135 -
151_ARG GLN 8.3kJPN
chr19:11446143 		rs145958698
- 0.0001 -
151_ARG TRP 8.3kJPN
chr19:18309556 		rs1445112642
- 0.0001 -
155_ASP GLY gnomAD
chr19:18309543 		rs369617917
- 0.000171113 -
166_ALA THR 8.3kJPN
chr5:58147014 		-
- 0.0001 -
178_ARG SER 8.3kJPN
chr1:52385727 		-
- 0.0001 -
178_ARG SER 8.3kJPN
chr5:58147050 		rs199852469
- - -
178_ARG HIS 8.3kJPN
chr5:58147051 		rs759104276
- 0.0001 -
183_ILE VAL gnomAD
chr5:58147065 		rs758296960
- 0.000107662 -
183_ILE VAL 8.3kJPN
chr19:11436187 		-
- 0.0001 -
187_MET VAL gnomAD
chr1:52385700 		rs34017695
- 0.000214746 -
187_MET VAL 8.3kJPN
chr5:58147077 		-
- 0.0001 -
189_ASP GLY gnomAD
chr1:52385693 		rs35212254
- 0.000206796 -
189_GLU LYS 8.3kJPN
chr19:18308378 		rs146051630
- 0.0001 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.