PDB ID 2MRE     CHAIN A
Protein name Polyubiquitin-C
Uniprot Accession P0CG48
The number of similar proteins 727
The number of binding states 181
The number of binding partners 140

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
2MRE (CHAIN: A)
1 Q9NS91  
2 Monomeric state
3 P61086  
4 P21580  
5 P19909  
6 P62068  
7 Q6NZ36  
8 P62988  
9 Q6RCR0  
10 Q96DC9  
11 O94609  
12 B3CVM3  
13 O95786  
14 P06104  
15 P38886  
16 Q9ES54  
17 1UZX  
18 Q9NZ52  
19 O60784  
20 Q53FG0  
21 P06654  
22 Q91XD6  
23 P45974  
24 O75604  
25 Q9Y263  
26 Q9UNA4  
27 Q6R3M4  
28 Q6R3M4  
29 O75886  
30 Q9UKV5  
31 Q9JLQ0  
32 Q13351  
33 Q14596  
34 P40087  
35 Q13191  
36 O95071  
37 Q9NYJ8  
38 P46934  
39 Q9JKV1  
40 P14735  
41 Q9UBN7  
42 P12004  
43 P21580  
44 Q5VVQ6  
45 Q9Y239  
46 Q96EP0  
47 P0C6U8  
48 K9N7C7  
49 P0C6Y1  
50 Q8N5J2  
51 Q93009  
52 Q9P2H5  
53 P54725  
54 Q8IYW5  
55 Q9UJX6  
56 O95551  
57 Q5ZTK4  
58 O55012  
59 Q9NWF9  
60 Q9BYM8  
61 Q96BN8  
62 Q86VP1  
63 Q8IYW5  
64 Q13137  
65 Q9P371  
66 Q7NY09  
67 P51784  
68 Q59FF6  
69 Q24K09  
70 Q6GQQ9  
71 Q9HAU4  
72 Q16611  
73 2J7Q  
74 Q9UK80  
75 P09936  
76 Q6TQR6  
77 4IG7  
78 M4STU1  
79 Q96AP4  
80 B0B9A0  
81 Q96RU2  
82 Q8TAC2  
83 Q5ZSI8  
84 A0A0S3MQV7  
85 Q70CQ2  
86 D6YWY5  
87 Q5ZSJ1  
88 W0NX70  
89 A0A2V2RSR1  
90 P54578  
91 Q9H3M9  
92 Q96G74  
93 Q3BYJ5  
94 Q70CQ3  
95 Q91TW9  
96 D7SFB8  
97 A0A034W4L8  
98 P40087  
99 J3KRR7  
100 Q99816  
101 Q73HU7  
102 B1EF49  
103 Q96RU2  
104 P34216  
105 P43588  
106 P36075  
107 Q63KH5  
108 Q12888  
109 Q13404  
110 P51668   P21580  
111 P61088   A0A2S6F4I5  
112 P62068   Q8TAF3  
113 P61086   Q9H0F5  
114 P62837   Q96PU5  
115 P62837   Q13191  
116 P62837   Q13490  
117 F5H388   B3CVM3  
118 O95786   O95786  
119 P0CG48   5OHM  
120 P54787   P54787  
121 P52490   P53152  
122 Q96H31   P54252  
123 P62972   P55036  
124 P0CG48   Q9UKV5  
125 P62987   P38764  
126 P0CG48   C9JR12  
127 P62990   Q9NYJ8  
128 P62988   P62988  
129 P0CG48   Q5VVQ6  
130 P61077   Q99PZ6  
131 P0CG48   P62837  
132 Q16186   Q9WUP7  
133 P0CH28   Q91X58  
134 P50102   P02281  
135 P61088   O88846  
136 P62837   Q6ZSG1  
137 P62837   Q96EP0  
138 P62992   Q8N5J2  
139 P0CG47   Q70CQ3  
140 Q8NCN4   P06899  
141 P61088   5VNZ  
142 P0CG47   Q16186  
143 P0CG47   P15374  
144 P68036   O60260  
145 P0CG48   Q8N5J2  
146 P0CG48   Q9NWF9  
147 P0CG47   P0DTC1  
148 P0CG48   Q5ZTB4  
149 P68036   Q9BYM8  
150 P68036   Q9NWF9  
151 P68036   Q6RCR4  
152 P0CG50   Q6NZ36  
153 P0CG50   Q9P371  
154 P62983   Q8IYW5  
155 P0CG47   Q99816  
156 P0CG50   E7FEV5  
157 P0CG47   Q9UM54  
158 P26358   P68431  
159 P35127   P35127  
160 P0CG48   Q96FW1  
161 J3KRR7   J3KRR7  
162 A5JUZ1   P33755  
163 6EQI   E0W1I1  
164 P62837   P36406   P36406  
165 P62988   3DVG   3DVG  
166 P62837   Q96CA5   Q96CA5  
167 P62837   Q00987   O15151  
168 Q7Z434   O95786   O95786  
169 O95786   O95786   O95786  
170 P62988   P62988   P62988  
171 P0CG48   Q5VVQ6   Q5VVQ6  
172 P0CG48   P62837   P62837  
173 P0CG48   P62837   Q96FW1  
174 P61088   5VO0   5VO0  
175 P0CG48   P0CG48   Q8NBR6  
176 P62988   O88522   O88522  
177 J3QS39   J3QS39   7NBB  
178 P0CG47   Q9UM54   Q9UM54  
179 J3QS39   Q5ZTB4   Q5ZTB4  
180 P62992   P62992   P62992   P62992  
181 P62837   Q7YRZ8   Q7YRZ8   Q7YRZ8  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  >9
  8
  7
  6
  5
  4
  3
  2
  1
  0

Sequence information

1   GSHMQIFVKT   LTGKTITLEV   EPSDTIENVK   AKIQDKEGIP   PDQQRLIFAG   50
51   KQLEDGRTLS   DYNIQKESTL   HLVLRLRGG       100

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
1_MET VAL 8.3kJPN
chr12:125398317
rs1269760522
- 0.0001 -
2_GLN HIS 8.3kJPN
chr2:55459966
rs370364740
- 0.0001 -
7_THR ILE 8.3kJPN
chr12:125398298
-
- 0.0001 -
15_LEU PHE 8.3kJPN
chr12:125397591
-
- 0.0001 -
19_PRO LEU 8.3kJPN
chr12:125397350
rs762204446
- 0.0002 -
20_SER ASN 8.3kJPN
chr12:125396435
-
- 0.0001 -
20_SER GLY 8.3kJPN
chr19:18684168
-
- 0.0003 -
26_VAL ILE 8.3kJPN
chr12:125397558
rs150983258
- 0.0012 -
37_PRO LEU 8.3kJPN
chr12:125397524
-
- 0.0001 -
37_PRO SER 8.3kJPN
chr12:125397753
rs1566302337
- 0.0001 -
38_SER PRO gnomAD
chr12:125397750
rs7137123
- 0.999936 -
39_ASP ASN 8.3kJPN
chr17:16285792
rs1466274713
- 0.0003 -
55_THR ILE 8.3kJPN
chr2:55461315
-
- 0.0001 -
57_SER PRO gnomAD
chr2:55461320
rs11557872
- 0.000975396 -
61_ILE THR 8.3kJPN
chr12:125396312
-
- 0.0001 -
67_LEU MET 8.3kJPN
chr12:125397207
rs201589267
- - -
73_LEU PHE 8.3kJPN
chr12:125397189
rs986458417
- 0.0001 -
76_GLY ASP 8.3kJPN
chr12:125396267
-
- 0.0001 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.