PDB ID 3BD9     CHAIN A
Protein name Heparan sulfate glucosamine 3-O-sulfotransferase 5
Uniprot Accession Q8IZT8
The number of similar proteins 1
The number of binding states 1
The number of binding partners 0

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
3BD9 (CHAIN: A)
1 Monomeric state

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  0

Sequence information

1   MGSSHHHHHH   SSGLVPRGSH   MQQLPKAIII   GVRKGGTRAL   LEMLNLHPAV   50
51   VKASQEIHFF   DNDENYGKGI   EWYRKKMPFS   YPQQITIEKS   PAYFITEEVP   100
101   ERIYKMNSSI   KLLIIVREPT   TRAISDYTQV   LEGKERKNKT   YYKFEKLAID   150
151   PNTCEVNTKY   KAVRTSIYTK   HLERWLKYFP   IEQFHVVDGD   RLITEPLPEL   200
201   QLVEKFLNLP   PRISQYNLYF   NATRGFYCLR   FNEIFNKCLA   GSKGRIHPEV   250
251   DPSVITKLRK   FFHPFNQKFY   QITGRTLNWP       300

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
88_GLN ARG gnomAD
chr6:114379199
rs141416529
- 0.000254605 -
93_ALA VAL gnomAD
chr6:114379184
rs148289240
- 0.000576779 -
96_ILE THR gnomAD
chr6:114379175
rs537896729
- 0.00042561 -
114_PRO SER gnomAD
chr6:114379122
rs144094472
- 0.0014635 -
164_GLU LYS 8.3kJPN
chr6:114378972
-
- 0.0003 -
225_LYS GLN gnomAD
chr6:114378789
rs138458938
- 0.000286572 -
228_ALA PRO 8.3kJPN
chr6:114378780
-
- 0.0001 -
247_ILE ASN VAR_052531 rs17793043
LB/B - -
247_ILE ASN gnomAD
chr6:114378722
rs17793043
- 0.00625423 -
253_VAL ASP 8.3kJPN
chr6:114378704
-
- 0.0001 -
269_VAL MET 8.3kJPN
chr6:114378657
rs140386644
- 0.0001 -
281_GLN LYS 8.3kJPN
chr6:114378621
rs764813664
- 0.0007 -
293_TYR HIS gnomAD
chr6:114378585
rs758350596
- 0.000425976 -
337_GLN LEU 8.3kJPN
chr6:114378452
-
- 0.0001 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.