PDB ID 7ICQ     CHAIN A
Protein name PROTEIN (DNA POLYMERASE BETA (E.C.2.7.7.7))
Uniprot Accession P06746
The number of similar proteins 414
The number of binding states 1
The number of binding partners 0

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
7ICQ (CHAIN: A)
1 Monomeric state

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Format:

Molecule viewer


Only interaction residues
#binding
partners
  0

Sequence information

1   MSKRKAPQET   LNGGITDMLT   ELANFEKNVS   QAIHKYNAYR   KAASVIAKYP   50
51   HKIKSGAEAK   KLPGVGTKIA   EKIDEFLATG   KLRKLEKIRQ   DDTSSSINFL   100
101   TRVSGIGPSA   ARKFVDEGIK   TLEDLRKNED   KLNHHQRIGL   KYFGDFEKRI   150
151   PREEMLQMQD   IVLNEVKKVD   SEYIATVCGS   FRRGAESSGD   MDVLLTHPSF   200
201   TSESTKQPKL   LHQVVEQLQK   VHFITDTLSK   GETKFMGVCQ   LPSKNDEKEY   250
251   PHRRIDIRLI   PKDQYYCGVL   YFTGSDIFNK   NMRAHALEKG   FTINEYTIRP   300
301   LGVTGVAGEP   LPVDSEKDIF   DYIQWKYREP   KDRSE     350

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
11_LEU PRO 8.3kJPN
chr8:42196174
rs750729543
- 0.0001 -
15_ILE LEU 8.3kJPN
chr8:42196185
-
- 0.0001 -
22_LEU PRO VAR_088253 -
US - -
39_TYR CYS VAR_088254 -
US - -
43_ALA THR 8.3kJPN
chr8:42202478
rs1163431290
- 0.0001 -
71_GLU GLY gnomAD
chr8:42206559
rs147215490
- 0.0028508 -
88_ILE VAL 8.3kJPN
chr8:42207525
rs769895566
- 0.0001 -
118_GLY VAL VAR_088255 rs764967314
LB/B - -
130_ASP TYR 8.3kJPN
chr8:42213051
-
- 0.0001 -
137_ARG GLN VAR_088256 rs12678588
LB/B - -
137_ARG GLN gnomAD
chr8:42213073
rs12678588
- 0.00137809 -
137_ARG GLN 8.3kJPN
chr8:42213073
rs12678588
- 0.0025 -
149_ARG ILE VAR_088257 rs779188078
LB/B - -
160_ASP ASN VAR_088258 -
US - -
160_ASP GLY 8.3kJPN
chr8:42214839
rs764645372
- 0.0001 -
185_ALA THR 8.3kJPN
chr8:42218815
-
- 0.0001 -
187_SER CYS 8.3kJPN
chr8:42218822
-
- 0.0001 -
190_ASP GLU 8.3kJPN
chr8:42218832
-
- 0.0001 -
191_MET VAL 8.3kJPN
chr8:42218833
-
- 0.0001 -
196_THR SER gnomAD
chr8:42218849
rs56121607
- 0.000739657 -
196_THR SER 8.3kJPN
chr8:42218849
rs56121607
- 0.0082 -
224_ILE VAL 8.3kJPN
chr8:42220178
rs1313860847
- 0.0002 -
233_THR ARG 8.3kJPN
chr8:42220206
-
- 0.0001 -
239_CYS ARG VAR_088259 -
US - -
242_PRO ARG VAR_018881 rs3136797
LB/B - -
242_PRO ARG gnomAD
chr8:42226805
rs3136797
- 0.0105808 -
251_PRO SER 8.3kJPN
chr8:42226831
-
- 0.0001 -
255_ILE VAL gnomAD
chr8:42226843
rs184348926
- 0.000238341 -
289_LYS MET VAR_088260 -
US - -
294_ASN ASP VAR_088261 -
US - -
295_GLU LYS VAR_088262 -
US - -
309_GLU GLY 8.3kJPN
chr8:42229093
-
- 0.0001 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.