PDB ID 1KEJ     CHAIN A
Protein name Terminal deoxynucleotidyltransferase short isoform
Uniprot Accession P09838
The number of similar proteins 39
The number of binding states 1
The number of binding partners 0

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
1KEJ (CHAIN: A)
1 Monomeric state

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Format:

Molecule viewer


Only interaction residues
#binding
partners
  0

Sequence information

1   KKISQYACQR   RTTLNNYNQL   FTDALDILAE   NDELRENEGS   CLAFMRASSV   50
51   LKSLPFPITS   MKDTEGIPCL   GDKVKSIIEG   IIEDGESSEA   KAVLNDERYK   100
101   SFKLFTSVFG   VGLKTAEKWF   RMGFRTLSKI   QSDKSLRFTQ   MQKAGFLYYE   150
151   DLVSCVNRPE   AEAVSMLVKE   AVVTFLPDAL   VTMTGGFRRG   KMTGHDVDFL   200
201   ITSPEATEDE   EQQLLHKVTD   FWKQQGLLLY   CDILESTFEK   FKQPSRKVDA   250
251   LDHFQKCFLI   LKLDHGRVHS   EKSGQQEGKG   WKAIRVDLVM   CPYDRRAFAL   300
301   LGWTGSRQFE   RDLRRYATHE   RKMMLDNHAL   YDRTKRVFLE   AESEEEIFAH   350
351   LGLDYIEPWE   RNA         400

Variants

Residue AA Source dbSNP Clinical
Significance
 Allele
Frequency
(> 0.0001)		 Disease name
174_ILE THR gnomAD
chr10:98080388 		rs769892205
- 0.000255133 -
174_ILE THR 8.3kJPN
chr10:98080388 		rs769892205
- 0.0001 -
180_GLU LYS 8.3kJPN
chr10:98080405 		-
- 0.0001 -
232_GLY GLU 8.3kJPN
chr10:98082430 		-
- 0.0001 -
269_MET LEU gnomAD
chr10:98084077 		rs200431503
- 0.000151274 -
279_SER LEU gnomAD
chr10:98084108 		rs375602690
- 0.000246829 -
280_ASP HIS gnomAD
chr10:98084110 		rs41291616
- 0.00437074 -
287_ARG GLN 8.3kJPN
chr10:98084132 		rs755818841
- 0.0005 -
307_GLU ASP gnomAD
chr10:98087271 		rs34175187
- 0.00103559 -
312_SER GLY 8.3kJPN
chr10:98087284 		-
- 0.0002 -
328_VAL ILE 8.3kJPN
chr10:98087332 		rs775435496
- 0.0001 -
331_THR ARG 8.3kJPN
chr10:98087342 		-
- 0.0001 -
356_ASP GLY 8.3kJPN
chr10:98088541 		rs1328796471
- 0.0001 -
365_VAL ALA 8.3kJPN
chr10:98088565 		-
- 0.0001 -
371_LYS ARG 8.3kJPN
chr10:98088583 		-
- 0.0002 -
373_GLY VAL 8.3kJPN
chr10:98092109 		rs762279234
- 0.0003 -
377_TYR HIS gnomAD
chr10:98092120 		rs544251536
- 0.00145371 -
407_ILE PHE 8.3kJPN
chr10:98092210 		-
- 0.0001 -
412_ARG HIS gnomAD
chr10:98092226 		rs151142894
- 0.000167128 -
412_ARG CYS 8.3kJPN
chr10:98092225 		rs943598334
- 0.0001 -
412_ARG HIS 8.3kJPN
chr10:98092226 		rs151142894
- 0.0002 -
416_ASP GLY gnomAD
chr10:98092238 		rs565246136
- 0.00032634 -
432_ARG HIS gnomAD
chr10:98092286 		rs142389547
- 0.000418153 -
443_ARG HIS gnomAD
chr10:98092319 		rs767993308
- 0.000191205 -
446_ALA THR gnomAD
chr10:98092327 		rs149947558
- 0.000111541 -
458_ARG ILE 8.3kJPN
chr10:98095658 		-
- 0.0001 -
461_ARG GLN 8.3kJPN
chr10:98095667 		rs142141382
- 0.0001 -
466_HIS TYR gnomAD
chr10:98095681 		rs145922527
- 0.000752329 -
468_ARG GLN gnomAD
chr10:98095688 		rs147702836
- 0.000808089 -
468_ARG GLN 8.3kJPN
chr10:98095688 		rs147702836
- 0.0024 -
471_ILE PHE 8.3kJPN
chr10:98095696 		rs200644125
- 0.0002 -
476_ALA SER 8.3kJPN
chr10:98095711 		-
- 0.0001 -
496_ALA GLU 8.3kJPN
chr10:98097935 		-
- 0.0005 -
499_GLY GLU gnomAD
chr10:98097944 		rs190218659
- 0.0001157 -
505_PRO LEU 8.3kJPN
chr10:98097962 		rs1351641715
- 0.0002 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.