PDB ID 1L9U     CHAIN C
Protein name RNA POLYMERASE, BETA SUBUNIT
Uniprot Accession Q9KWU7
The number of similar proteins 85
The number of binding states 10
The number of binding partners 9

Molecule viewer


Only interaction residues
#binding
partners
  7
  6
  5
  4
  3
  2
  1
  0

Sequence information

1   MEIKRFGRIR   EVIPLPPLTE   IQVESYKKAL   QADVPPEKRE   NVGIQAAFKE   50
51   TFPIEEGDKG   KGGLVLDFLE   YRIGDPPFSQ   DECREKDLTY   QAPLYARLQL   100
101   IHKDTGLIKE   DEVFLGHLPL   MTEDGSFIIN   GADRVIVSQI   HRSPGVYFTP   150
151   DPARPGRYIA   SIIPLPKRGP   WIDLEVEASG   VVTMKVNKRK   FPLVLLLRVL   200
201   GYDQETLVRE   LSAYGDLVQG   LLDEAVLAMR   PEEAMVRLFT   LLRPGDPPKK   250
251   DKALAYLFGL   LADPKRYDLG   EAGRYKAEEK   LGVGLSGRTL   VRFEDGEFKD   300
301   EVFLPTLRYL   FALTAGVPGH   EVDDIDHLGN   RRIRTVGELM   ADQFRVGLAR   350
351   LARGVRERMV   MGSPDTLTPA   KLVNSRPLEA   ALREFFSRSQ   LSQFKDETNP   400
401   LSSLRHKRRI   SALGPGGLTR   ERAGFDVRDV   HRTHYGRICP   VETPEGANIG   450
451   LITSLAAYAR   VDALGFIRTP   YRRVKNGVVT   EEVVYMTASE   EDRYTIAQAN   500
501   TPLEGDRIAT   DRVVARRRGE   PVIVAPEEVE   FMDVSPKQVF   SLNTNLIPFL   550
551   EHDDANRALM   GSNMQTQAVP   LIRAQAPVVM   TGLEERVVRD   SLAALYAEED   600
601   GEVVKVDGTR   IAVRYEDGRL   VHPLRRYARS   NQGTAFDQRP   RVRVGQRVKK   650
651   GDLLADGPAS   EEGFLALGQN   VLVAIMPFDG   YNFEDAIVIS   EELLKRDFYT   700
701   SIHIERYEIE   ARDTKLGPER   ITRDIPHLSE   AALRDLDEEG   IVRIGAEVKP   750
751   GDILVGRTSF   KGEQEPSPEE   RLLRSIFGEK   ARDVKDTSLR   VPPGEGGIVV   800
801   GRLRLRRGDP   GVELKPGVRE   VVRVFVAQKR   KLQVGDKLAN   RHGNKGVVAK   850
851   ILPVEDMPHL   PDGTPVDVIL   NPLGVPSRMN   LGQILETHLG   LAGYFLGQRY   900
901   ISPVFDGATE   PEIKELLAEA   FNLYFGKRQG   EGFGVDKREK   EVLARAEKLG   950
951   LVSPGKSPEE   QLKELFDLGK   VVLYDGRTGE   PFEGPIVVGQ   MFIMKLYHMV   1000
1001   EDKMHARSTG   PYSLITQQPL   GGKAQFGGQR   FGEMEVWALE   AYGAAHTLQE   1050
1051   MLTIKSDDIE   GRNAAYQAII   KGEDVPEPSV   PESFRVLVKE   LQALALDVQT   1100
1101   LDEKDNPVDI   FEGLASKR         1150

Variants

Residue AA Source dbSNP Clinical
Significance
 Allele
Frequency
(> 0.0001)		 Disease name
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.