PDB ID 2GHO     CHAIN D
Protein name DNA-directed RNA polymerase subunit beta',DNA-directed RNA polymerase subunit beta'
Uniprot Accession Q9KWU6
The number of similar proteins 3
The number of binding states 2
The number of binding partners 3

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state		 Binding partners
2GHO (CHAIN: D)
1 Q9KWU7  
2 Q9KWU7   Q9EVV4   Q9KWU8  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  2
  1
  0

Sequence information

1   MKKEVRKVRI   ALASPEKIRS   WSYGEVEKPE   TINYRTLKPE   RDGLFDERIF   50
51   GPIKDYECAC   GKYKRQRFEG   KVCERCGVEV   TRSIVRRYRM   GHIELATPAA   100
101   HIWFVKDVPS   KIGTLLDLSA   TELEQVLYFN   KYIVLDPKGA   VLDGVPVEKR   150
151   QLLTDEEYGG   IDARMGAEAI   QELLKELDLE   KLERELLEEM   KHPSRARRAK   200
201   ARKRLEVVRA   FLDSGNRPEW   MILEAVPVLP   PDLRPMVQVD   GGRFATSDLN   250
251   DLYRRLINRN   NRLKKLLAQG   APEIIIRNEK   RMLQEAVDAV   IDNGRRGSPV   300
301   TNPGSERPLR   SLTDILSGKQ   GRFRQNLLGK   RVDYSGRSVI   VVGPQLKLHQ   350
351   CGLPKRMALE   LFKPFLLKKM   EEKAFAPNVK   AARRMLERQR   DIKDEVWDAL   400
401   EEVIHGKVVL   LNRAPTLHRL   GIQAFQPVLV   EGQSIQLHPL   VCEAFNADFD   450
451   GDQMAVHVPL   SSFAQAEARI   QMLSAHNLLS   PASGEPLAKP   SRDIILGLYY   500
501   ITQVRKEKKG   AGMAFATPEE   ALAAYERGEV   ALNAPIVVAG   RETSVGRLKF   550
551   VFANPDEALL   AVAHGLLDLQ   DVVTVRYLGR   RLETSPGRIL   FARIVGEAVG   600
601   DEKVAQELIQ   MDVPQEKNSL   KDLVYQAFLR   LGMEKTARLL   DALKYYGFTL   650
651   STTSGITIGI   DDAVIPEEKQ   RYLEEADRKL   RQIEQAYEMG   FLTDRERYDQ   700
701   VIQLWTETTE   KVTQAVFKNF   EENYPFNPLY   VMAQSGARGN   PQQIRQLCGM   750
751   RGLMQKPSGE   TFEVPVRSSF   REGLTVLEYF   ISSHGARKGG   ADTALRTADS   800
801   GYLTRKLVDV   AHEIVVREAD   CGTTNYISVP   LFQMDEVTRT   LRLRKRSDIE   850
851   SGLYGRVLAR   EVEALGRRLE   EGRYLSLEDV   HFLIKAAEAG   EVREVPVRSP   900
901   LTCQTRYGVC   QKCYGYDLSM   ARPVSIGEAV   GVVAAESIGE   PGTQLTMRTF   950
951   HTGGVAVGTD   ITQGLPRVIE   LFEARRPKAK   AVISEIDGVV   RIEEGEDRLS   1000
1001   VFVESEGFSK   EYKLPKDARL   LVKDGDYVEA   GQPLTRGAID   PHQLLEAKGP   1050
1051   EAVERYLVDE   IQKVYRAQGV   KLHDKHIEIV   VRQMLKYVEV   TDPGDSRLLE   1100
1101   GQVLEKWDVE   ALNERLIAEG   KVPVAWKPLL   MGVTKSALST   KSWLSAASFQ   1150
1151   NTTHVLTEAA   IAGKKDELIG   LKENVILGRL   IPAGTGSDFV   RFTQVVDQRT   1200
1201   LKAIEEARKE   AVEAKEKEAP   RRPVRREQPG   KGL     1250

Variants

Residue AA Source dbSNP Clinical
Significance
 Allele
Frequency
(> 0.0001)		 Disease name
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.