PDB ID 5M93     CHAIN A
Protein name Polyubiquitin-B
Uniprot Accession P0CG47
The number of similar proteins 724
The number of binding states 183
The number of binding partners 142

Coloring

Unicolor (beige)

The number of binding partners

Group

Binding
state
Binding partners
5M93 (CHAIN: A)
1 Monomeric state
2 Q9P371  
3 Q7NY09  
4 Q96BN8  
5 P49427  
6 P22314  
7 P38886  
8 Q13137  
9 P62068  
10 O95786  
11 B3CVM3  
12 Q6NZ36  
13 P62988  
14 Q6RCR0  
15 P06654  
16 Q86VP1  
17 Q9NS91  
18 P61086  
19 P21580  
20 Q9ES54  
21 1UZX  
22 Q9NZ52  
23 O60784  
24 Q53FG0  
25 P06654  
26 Q91XD6  
27 P45974  
28 O75604  
29 Q9Y263  
30 Q9UNA4  
31 Q6R3M4  
32 Q6R3M4  
33 O75886  
34 Q9UKV5  
35 Q9JLQ0  
36 Q13351  
37 Q14596  
38 P40087  
39 Q13191  
40 O95071  
41 Q9NYJ8  
42 P46934  
43 Q9JKV1  
44 P14735  
45 Q9UBN7  
46 P12004  
47 P21580  
48 Q5VVQ6  
49 Q9Y239  
50 Q96EP0  
51 P0C6U8  
52 K9N7C7  
53 P0C6Y1  
54 Q8N5J2  
55 Q93009  
56 Q9P2H5  
57 P54725  
58 Q8IYW5  
59 B9G207  
60 Q9UJX6  
61 O95551  
62 Q5ZTK4  
63 O55012  
64 Q9NWF9  
65 Q9BYM8  
66 Q8IYW5  
67 Q99816  
68 P51784  
69 Q59FF6  
70 Q96RU2  
71 Q73HU7  
72 B1EF49  
73 Q96RU2  
74 Q24K09  
75 Q9HAU4  
76 Q16611  
77 2J7Q  
78 Q9UK80  
79 P09936  
80 Q6TQR6  
81 4IG7  
82 M4STU1  
83 Q96AP4  
84 B0B9A0  
85 Q8TAC2  
86 Q5ZSI8  
87 A0A0S3MQV7  
88 Q70CQ2  
89 D6YWY5  
90 Q5ZSJ1  
91 W0NX70  
92 A0A2V2RSR1  
93 P54578  
94 Q9H3M9  
95 Q96G74  
96 Q3BYJ5  
97 Q6GQQ9  
98 Q70CQ3  
99 Q91TW9  
100 D7SFB8  
101 A0A034W4L8  
102 P40087  
103 J3KRR7  
104 P34216  
105 P43588  
106 P36075  
107 Q12888  
108 Q13404  
109 P51668   O88846  
110 P62068   Q8TAF3  
111 O95786   O95786  
112 F5H388   B3CVM3  
113 P61088   Q5ZTL4  
114 P0CG48   5OHM  
115 P68036   Q6RCR4  
116 P51668   P21580  
117 P54787   P54787  
118 P52490   P53152  
119 Q96H31   P54252  
120 P62972   P55036  
121 P0CG48   Q9UKV5  
122 P62987   P38764  
123 P0CG48   C9JR12  
124 P62990   Q9NYJ8  
125 P62988   P62988  
126 P0CG48   Q5VVQ6  
127 P61077   Q99PZ6  
128 P0CG48   P62837  
129 Q16186   Q9WUP7  
130 P0CH28   Q91X58  
131 P50102   P02281  
132 P62837   Q6ZSG1  
133 P62837   Q96EP0  
134 P62992   Q8N5J2  
135 P0CG47   Q70CQ3  
136 Q8NCN4   P06899  
137 P61088   5VNZ  
138 P0CG47   Q16186  
139 P0CG47   P15374  
140 P68036   O60260  
141 P0CG48   Q8N5J2  
142 P61088   J3QS39  
143 P0CG48   Q9NWF9  
144 P0CG47   P0DTC1  
145 P0CG48   Q5ZTB4  
146 P68036   Q9BYM8  
147 P68036   Q9NWF9  
148 P0CG50   Q6NZ36  
149 P0CG50   Q9P371  
150 P62983   Q8IYW5  
151 P0CG47   Q99816  
152 P62837   Q96PU5  
153 P62837   Q13191  
154 A5JUZ1   P33755  
155 P0CG50   E7FEV5  
156 P0CG47   Q9UM54  
157 P26358   P68431  
158 P35127   P35127  
159 P0CG48   Q96FW1  
160 J3KRR7   J3KRR7  
161 6EQI   E0W1I1  
162 P61077   O75592  
163 P51668   Q9C040   Q9C040  
164 Q7Z434   O95786   O95786  
165 O95786   O95786   O95786  
166 P62837   Q00987   Q00987  
167 P62988   P62988   P62988  
168 P0CG48   Q5VVQ6   Q5VVQ6  
169 P0CG48   P62837   P62837  
170 P0CG48   P62837   Q96FW1  
171 P61088   Q59GW5   Q59GW5  
172 P61088   Q8TBB1   Q8TBB1  
173 P61088   5VO0   5VO0  
174 P61088   P19474   P19474  
175 P0CG48   P0CG48   Q8NBR6  
176 P0CG48   7KEO   7KEO  
177 P62837   Q96CA5   Q96CA5  
178 P62988   O88522   O88522  
179 P0CG47   Q9UM54   Q9UM54  
180 J3QS39   Q5ZTB4   Q5ZTB4  
181 J3QS39   J3QS39   7NBB  
182 P62992   P62992   P62992   P62992  
183 P62837   Q7YRZ8   Q7YRZ8   Q7YRZ8  

Downdload

Format:

Molecule viewer


Only interaction residues
#binding
partners
  >9
  8
  7
  6
  5
  4
  3
  2
  1
  0

Sequence information

1   GPLGSQIFVK   TLTGKTITLE   VEPSDTIENV   KAKIQDKEGI   PPDQQRLIFA   50
51   GKQLEDGRTL   SDYNIQKEST   LHLVLRLRGG       100

Variants

Residue AA Source dbSNP Clinical
Significance
Allele
Frequency
(> 0.0001)
Disease name
2_GLN HIS 8.3kJPN
chr2:55459966
rs370364740
- 0.0001 -
7_THR ILE 8.3kJPN
chr12:125398298
-
- 0.0001 -
15_LEU PHE 8.3kJPN
chr12:125397591
-
- 0.0001 -
19_PRO LEU 8.3kJPN
chr12:125397350
rs762204446
- 0.0002 -
20_SER ASN 8.3kJPN
chr12:125396435
-
- 0.0001 -
20_SER GLY 8.3kJPN
chr19:18684168
-
- 0.0003 -
26_VAL ILE 8.3kJPN
chr12:125397558
rs150983258
- 0.0012 -
37_PRO LEU 8.3kJPN
chr12:125397524
-
- 0.0001 -
37_PRO SER 8.3kJPN
chr12:125397753
rs1566302337
- 0.0001 -
38_SER PRO gnomAD
chr12:125397750
rs7137123
- 0.999936 -
39_ASP ASN 8.3kJPN
chr17:16285792
rs1466274713
- 0.0003 -
55_THR ILE 8.3kJPN
chr2:55461315
-
- 0.0001 -
57_SER PRO gnomAD
chr2:55461320
rs11557872
- 0.000975396 -
61_ILE THR 8.3kJPN
chr12:125396312
-
- 0.0001 -
67_LEU MET 8.3kJPN
chr12:125397207
rs201589267
- - -
73_LEU PHE 8.3kJPN
chr12:125397189
rs986458417
- 0.0001 -
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Reference

PiSite: a database of protein interaction sites using multiple binding states in the PDB, Miho Higurashi, Takashi Ishida and Kengo Kinoshita, Nucleic Acids Research 2009 37(Database issue):D360-D364

COPYRIGHTc2008-2019 Miho Higurashi, Takashi Ishida and Kengo Kinoshita. All rights reserved.